Welcome!
The Genomics Core Facility prepares and sequences DNA libraries for Next Generation Sequencing (NGS) application, including whole genomes, transcriptomes, epigenomes, and more. Our core staff has particular expertise in prepares bacterial genome assembly and mammalian single-cell genomics (extracting nucleic acids from single cells for genomic analysis). The core also offers a limited selection of instruments to qualified reserachers for unassisted use.
University of Texas at San Antonio
One UTSA Circle
Biotechnology, Sciences and Engineering Building
Room 3.108
Monday-Friday
8:00am - 5:00pm
Principal Investigators (PIs)
1) Select "sign-up" or "login" button at the top-right of this screen and register using your myUTSA ID (abc123) credentials.
2) If you are a PI with a valid Project ID assigned to you in PeopleSoft, your Group/Lab account will automatically be created with access to those avaialable funding accounts upon first-time login. Fund information is automatically imported nightly. Please contact iLab@utsa.edu if your funding information is not available in our system.
Non-PI Users
1) Select "sign-up" or "login" button at the top-right of this screen and register using your myUTSA ID (abc123) credentials.
2) Fill out the iLab registration page, select your PI Group/Lab, and verify your contact information.
3) Once your registration is submitted, the PI and/or Lab Manager will receive a notification that you have requested a membership to the Group/Lab. They will need to 1) approve your membership and 2) assign funds to your account (Speedtypes=Project ID or Cost Center) before you can submit a request and use core facility resources.
Non-UTSA Users
1) Complete the External User Access Request Form (here).
2) UTSA Staff will validate/coordinate if your institution has an active Research Service Agreement with UTSA. **This agreement must be signed by both institutions before any work can be performed.
3) Complete the iLab registration wizard for "Non-UTSA Users".
Registration for Non-UTSA Customers
1) Select "sign-up" button at the top-right of the screen (or here)
2) Receive a welcome email from iLab (typically within one business day) with login credentials.
3) Use login credentials provided to finish account creation.
4) If/once an active Service Agreement is signed, your user account will be granted access to UTSA's iLab System.
For further information regarding this service agreement, please contact ORIS@utsa.edu.
For any assistance or general questions regarding iLab, please contact iLab@utsa.edu
| Name | Role | Phone | Location | |
|---|---|---|---|---|
| Sean Vargas |
Scientific Director
|
(210) 458-4089
|
Genomics.Core@utsa.edu
|
BSE 3.108
|
| Brian Hermann |
Scientific Advisory Board Chair
|
| Service Item List |
| ► Single-Cell Services (11) | |||
| Name | Description | Price | |
|---|---|---|---|
| 10X Genomics - 3' Gene Expression - Sample Fee | (view additional details) |
Internal
$1,592.00
Sample
Higher-Ed/Non-Profit $2,381.00 Sample Commercial/Industry $2,381.00 Sample UT System/In Network $1,592.00 Sample |
|
| 10x Genomics - 3' Gene Expression - Set up Fee | (view additional details) |
Internal
$740.00
each
Higher-Ed/Non-Profit $1,107.00 each Commercial/Industry $1,107.00 each UT System/In Network $740.00 each |
|
| 10x Genomics - ATAC-Seq - Sample Fee | (view additional details) |
Internal
$1,452.00
each
UT System/In Network $1,452.00 each Higher-Ed/Non-Profit $2,171.00 each Commercial/Industry $2,171.00 each |
|
| 10x Genomics - ATAC-Seq - Set up Fee | (view additional details) |
Internal
$740.00
Run
Higher-Ed/Non-Profit $1,107.00 Run Commercial/Industry $1,107.00 Run UT System/In Network $740.00 Run |
|
| Milo - Single-Cell Westen Blot - Chip Loading Consumables | (view additional details) |
Internal
$191.00
each
Higher-Ed/Non-Profit $286.00 each Commercial/Industry $286.00 each UT System/In Network $191.00 each |
|
| Milo - Single-Cell Westen Blot - Probing & Scanning Consumables | (view additional details) |
Internal
$33.00
each
Higher-Ed/Non-Profit $50.00 each Commercial/Industry $50.00 each UT System/In Network $33.00 each |
|
| Milo - Single-Cell Westen Blot - Stripping Chip Consumables | (view additional details) |
Internal
$28.00
each
UT System/In Network $28.00 each Higher-Ed/Non-Profit $42.00 each Commercial/Industry $42.00 each |
|
| Milo - Single-Cell Westen Blot - Chip Loading Assisted Fee | (view additional details) |
Internal
$42.00
each
Higher-Ed/Non-Profit $63.00 each Commercial/Industry $63.00 each UT System/In Network $42.00 each |
|
| Milo - Single-Cell Westen Blot - Probing & Scanning Assited Fee | (view additional details) |
Internal
$105.00
Run
UT System/In Network $105.00 each Higher-Ed/Non-Profit $157.00 each Commercial/Industry $157.00 each |
|
| Milo - Single-Cell Westen Blot - Stripping Fee | (view additional details) |
Internal
$105.00
each
UT System/In Network $105.00 each Higher-Ed/Non-Profit $157.00 each Commercial/Industry $157.00 each |
|
| Milo - Single-Cell Westen Blot - Analysis Fee | (view additional details) |
Internal
$42.00
each
UT System/In Network $42.00 each Higher-Ed/Non-Profit $63.00 each Commercial/Industry $63.00 each |
|
| ► Library Prep (8) | |||
| Name | Description | Price | |
| Whole Genome Sequencing - Nextera XT - Sample Fee | (view additional details) | Inquire | |
| Whole Genome Sequencing - Nextera XT - Set Up Fee | (view additional details) |
Internal
$115.00
Run
UT System/In Network $115.00 Run Higher-Ed/Non-Profit $172.00 Run Commercial/Industry $172.00 Run |
|
| Gene Expression Sequencing - QuantSeq 3' mRNA-Seq - Sample Fee | (view additional details) |
Internal
$44.00
each
Higher-Ed/Non-Profit $66.00 each Commercial/Industry $66.00 each UT System/In Network $44.00 each |
|
| Gene Expression Sequencing - QuantSeq 3' mRNA-Seq - Set up Fee | (view additional details) |
Internal
$264.00
Sample
UT System/In Network $264.00 Sample Higher-Ed/Non-Profit $395.00 Sample Commercial/Industry $395.00 Sample |
|
| 16S Sequencing - Sample Fee | (view additional details) |
Internal
$22.00
Sample
UT System/In Network $22.00 Sample Higher-Ed/Non-Profit $33.00 Sample Commercial/Industry $33.00 Sample |
|
| 16S Sequencing - Set up Fee | (view additional details) |
Internal
$111.00
Run
UT System/In Network $111.00 Run Higher-Ed/Non-Profit $166.00 Run Commercial/Industry $166.00 Run |
|
| Amplicon Sequencing - Sample Fee | (view additional details) |
Internal
$25.00
Sample
UT System/In Network $25.00 Sample Commercial/Industry $38.00 Sample Higher-Ed/Non-Profit $38.00 Sample |
|
| Amplicon Sequencing - Set up Fee (per run) | (view additional details) |
Internal
$74.00
Run
UT System/In Network $74.00 Run Higher-Ed/Non-Profit $111.00 Run Commercial/Industry $111.00 Run |
|
| ► Sequencing (9) | |||
| Name | Description | Price | |
| MiSeq v2 - 150 PE (15 M Reads) | (view additional details) |
Internal
$1,343.00
Run
Higher-Ed/Non-Profit $2,008.00 Run Commercial/Industry $2,008.00 Run UT System/In Network $1,343.00 Run |
|
| MiSeq v2 - 250 PE (15 M Reads) | (view additional details) |
Internal
$1,478.00
Run
Higher-Ed/Non-Profit $2,210.00 Run Commercial/Industry $2,210.00 Run UT System/In Network $1,478.00 Run |
|
| MiSeq v2 - 50 SE (15 M Reads) | (view additional details) |
Internal
$1,098.00
Run
Higher-Ed/Non-Profit $1,642.00 Run Commercial/Industry $1,642.00 Run UT System/In Network $1,098.00 Run |
|
| MiSeq v2 Micro - 150 PE (4 M Reads) | (view additional details) |
Internal
$698.00
Run
Higher-Ed/Non-Profit $1,044.00 Run Commercial/Industry $1,044.00 Run UT System/In Network $698.00 Run |
|
| MiSeq v2 Nano - 150 PE (1 M Reads) | (view additional details) |
Internal
$543.00
Run
Higher-Ed/Non-Profit $812.00 Run Commercial/Industry $812.00 Run UT System/In Network $843.00 Run |
|
| MiSeq v2 Nano - 250 PE (1 M Reads) | (view additional details) |
Internal
$603.00
Run
Higher-Ed/Non-Profit $902.00 Run Commercial/Industry $902.00 Run UT System/In Network $603.00 Run |
|
| MiSeq v3 - 75 PE (25 M Reads) | (view additional details) |
Internal
$1,193.00
Run
Higher-Ed/Non-Profit $1,784.00 Run Commercial/Industry $1,784.00 Run UT System/In Network $1,193.00 Run |
|
| NextSeq - 75 paired-end (130 M reads) | (view additional details) |
Internal
$1,400.00
each
Higher-Ed/Non-Profit $2,093.00 each Commercial/Industry $2,093.00 each UT System/In Network $1,400.00 each |
|
| NovaSeq S4 - 150 paired-end (2000 M reads) (per run) | (view additional details) |
Internal
$6,000.00
each
Higher-Ed/Non-Profit $8,970.00 each Commercial/Industry $8,970.00 each UT System/In Network $6,000.00 each |
|
| ► Analysis Services (2) | |||
| Name | Description | Price | |
| Cell Ranger mkfastq/counts - Sample Fee | (view additional details) |
Internal
$50.00
Sample
Higher-Ed/Non-Profit $75.00 Sample Commercial/Industry $75.00 Sample UT System/In Network $50.00 Sample |
|
| Cell Ranger aggr - Run Fee | (view additional details) |
Internal
$50.00
each
Higher-Ed/Non-Profit $75.00 each Commercial/Industry $75.00 each UT System/In Network $50.00 each |
|
| ► Sample QC (14) | |||
| Name | Description | Price | |
| Bioanalyzer - High Sensitivity DNA Chip | (view additional details) |
Internal
$81.00
Run
Higher-Ed/Non-Profit $122.00 Run Commercial/Industry $122.00 Run UT System/In Network $81.00 Run |
|
| Bioanalyzer - Instrument Only Fee | Inquire | ||
| Bioanalyzer Assited Fee | (view additional details) |
Internal
$42.00
Run
Higher-Ed/Non-Profit $92.00 Run Commercial/Industry $92.00 Run UT System/In Network $42.00 Run |
|
| PicoGreen Microplate Assay | (view additional details) |
Internal
$2.00
Sample
Higher-Ed/Non-Profit $3.00 Sample Commercial/Industry $3.00 Sample UT System/In Network $2.00 Sample |
|
| PicoGreen Miroplate Assay - Set up Fee | (view additional details) |
Internal
$86.00
Run
Higher-Ed/Non-Profit $129.00 Run Commercial/Industry $129.00 Run UT System/In Network $86.00 Run |
|
| Qubit Assisted Fee | (view additional details) |
Internal
$8.00
Run
Higher-Ed/Non-Profit $12.00 Run Commercial/Industry $12.00 Run UT System/In Network $8.00 Run |
|
| Qubit dsDNA Assay | (view additional details) |
Internal
$2.00
Sample
Higher-Ed/Non-Profit $3.00 Sample Commercial/Industry $3.00 Sample UT System/In Network $2.00 Sample |
|
| Qubit RNA Assay | (view additional details) |
Internal
$2.00
Sample
Higher-Ed/Non-Profit $3.00 Sample Commercial/Industry $3.00 Sample UT System/In Network $2.00 Sample |
|
| TapeStation - D1000 DNA Assay | (view additional details) |
Internal
$6.00
Sample
Higher-Ed/Non-Profit $9.00 Sample Commercial/Industry $9.00 Sample UT System/In Network $6.00 Sample |
|
| TapeStation - High Sensitivity D1000 DNA Assay | (view additional details) |
Internal
$7.00
Sample
Higher-Ed/Non-Profit $11.00 Sample Commercial/Industry $11.00 Sample UT System/In Network $7.00 Sample |
|
| TapeStation - High Sensitivity D5000 DNA Assay | (view additional details) |
Internal
$8.00
Sample
Higher-Ed/Non-Profit $12.00 Sample Commercial/Industry $12.00 Sample UT System/In Network $8.00 Sample |
|
| TapeStation - Instrument Only | Inquire | ||
| TapeStation - RNA Assay | (view additional details) |
Internal
$6.00
Sample
Higher-Ed/Non-Profit $9.00 Sample Commercial/Industry $9.00 Sample UT System/In Network $6.00 Sample |
|
| TapeStation Assisted Fee | (view additional details) |
Internal
$12.00
Run
Higher-Ed/Non-Profit $18.00 Run Commercial/Industry $18.00 Run UT System/In Network $12.00 Run |
|
| ► Genotyping & Gene Expression (3) | |||
| Name | Description | Price | |
| qPCR Genotyping (SYBR Green) - Sample Fee |
Internal
$0.57
each
Higher-Ed/Non-Profit $0.86 each Commercial/Industry $0.86 each UT System/In Network $0.57 each |
||
| qPCR Genotyping (TaqMan) - Sample Fee |
Internal
$0.67
each
Higher-Ed/Non-Profit $1.00 each Commercial/Industry $1.00 each UT System/In Network $0.67 each |
||
| qPCR Genotyping Set Up Fee |
Internal
$49.23
each
Higher-Ed/Non-Profit $73.60 each Commercial/Industry $73.60 each UT System/In Network $49.23 each |
||
| ► Nucleic Acid Extraction (2) | |||
| Name | Description | Price | |
| gDNA Extraction & Quantification Sample Fee |
Internal
$2.44
each
Higher-Ed/Non-Profit $3.65 each Commercial/Industry $3.65 each UT System/In Network $2.44 each |
||
| gDNA Extraction & Quantification Set-Up Fee |
Internal
$111.49
each
Higher-Ed/Non-Profit $166.68 each Commercial/Industry $166.68 each UT System/In Network $111.49 each |
||
| ► Automated Electrophoresis (2) | |||||||||
|
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| ► Nucleic Acid Quantification (2) | |||||||||
|
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| ► Sonication (1) | |||||||||
|
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| ► qPCR (2) | |||||||||
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